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Showing posts with label science. Show all posts
Showing posts with label science. Show all posts

Tuesday, March 17, 2009

An Islamic Perspective on Stem Cells Research

by Dr. Muzammil Siddiqi
Q: What is the position of Shari’ah on stem cells research according to majority of our scholars? (Aamer Mahmoud)

A: Let us first understand what is this research and what are the issues involved in it. Following is a brief explanation written by my son Dr. Imran Siddiqi, a Ph.D. in Genetics. He says:

“The human body consists of many kinds of cells. These cells are very diverse in their structure and function. For example, neurons that make up the brain are very different from cells that make up our liver, cells that allow our heart to pump blood look nothing like the cells that make up our skin. In spite of their vast differences, however, all cells in the human body contain the same DNA. DNA provides the information, in the form of genes, which is necessary to make all these various cell types. Put simply, liver cells are liver cells because only a small set of genes are turned on in these cells while the rest are shut off. In the same way, cells in the brain or skin have their own set of genes activated, and other sets turned off. However, because all cells contain the entire set of DNA, they possess the information needed to make any kind of cell, though most of this information is not being used.

“How do cells become specialized to form the different organs in the body? Human development begins when a sperm cell fuses with an egg cell. This initial fertilized egg, although it is only a single cell, is able to form an entire human being. This cell starts to divide into additional cells, which at this early stage are all able to produce a complete organism. These cells are therefore called totipotent, meaning they have total potential to produce all cell types present in a living human. As development proceeds and an embryo forms, these cells become pluripotent, meaning they have potential to become many different kinds of cells but can no longer give rise to a complete embryo. Later in development, through a process called cell differentiation, these pluripotent cells eventually give rise to the different and more specialized kinds of cells in the body and the different organs begin to form.

“What are stem cells? Stem cells are cells that have not gone through the process of cell differentiation and therefore have the potential to give rise to many different kinds of specialized cells. For instance a stem cell could be used to produce liver cells, brain cells, heart muscle cells, blood cells, etc. The current sources of stem cells include embryos (which, as explained above, consist of pluripotent cells) and fetal tissue. In addition, some recent evidence suggests that even adults have a small number of mulitpotent cells that can be isolated and can later differentiate into various cell types.

“One source of stem cells is from embryos that were formed from a process called in vitro fertilization. This is a technique that has been used by doctors for some time, where eggs are removed from a woman after stimulation of the ovaries, and the isolated eggs are then fertilized by sperm cells in the laboratory. The fertilized eggs are allowed to divide for a few cycles and are then implanted into the woman’s uterus, where a normal pregnancy can then take place. The purpose of this technique is to allow couples who cannot normally have children to be able to reproduce. The technique is not that efficient, however, and so doctors usually produce several embryos, hoping that at least one will be able to implant correctly in the uterus and start growing. The remaining embryos are either frozen for later use or are destroyed. Recently, scientists found that they can take these embryos at the stage before they are implanted into the uterus (within 1-5 days after fertilization), and remove pluripotent cells from them. These cells can then be grown and divided on dishes in the laboratory, and then theoretically used to produce all kinds of tissues, from liver cells to heart muscle cells to brain cells.

“Why are stem cells important? Research on stem cells has much value both for scientific understanding of human development and for its potential to treat human disease. Many experiments on the effectiveness and safety of new drugs or treatments could be done on cell lines made from stem cells, instead of having to experiment on humans. In addition, stem cells might be used to produce liver cells that can then be formed into a functioning liver and transplanted into patients with liver failure. This would solve the current problem of organ shortage and could also solve the problem of immune rejection of organs. Stem cells might be used to create cells that produce insulin, which can then be transplanted into patients with type I diabetes. In short, stem cells have the potential to cure many diseases from liver disease, to diabetes, to Alzheimer’s and Parkinson’s disease, to heart disease, to spinal cord injury, and the list can go on and on.

“To make this potential of stem cells a reality, much research needs to be done in the next few years. To do this research, scientists need an ample supply of stem cells. Controversy arises because the main source stem cells are embryos used for in vitro fertilization. By removing cells from these embryos, scientists are essentially destroying the embryo, which could have otherwise gone on to develop into a child. However, as explained above, these embryos were developed initially in the laboratory solely for the sake of reproduction and, due to limitations of the in vitro fertilization technique, they were produced in excess of what was required for this purpose. As a result, the remaining embryos would have either been frozen indefinitely or destroyed. Perhaps if research was limited to using only these already existing embryos, it would be more acceptable than if embryos were created and destroyed specifically for the sake of acquiring stem cells.

“Are there any other alternatives? What about stem cells from adults? Some research has shown that even adult humans have a small number of cells that are multipotent, meaning they have the potential to become several different types of specialized cells. The best example of this is cells from the bone marrow. These cells have long been known to be able to produce the different types of blood cells, from white blood cells to red blood cells to platelets involved in blood clotting. Just this past year, a group of researchers showed that some rare bone marrow cells can also be triggered to form fat, cartilage, bone, and muscle. Additional research can theoretically be done on ways to make these multipotent cells become pluripotent; in other words to somehow trigger these cells to go in reverse and become less specialized, and then allow them to differentiate into many kinds of cells. In spite of this interesting research on adult stem cells, it appears that stem cells derived from adults will not be as versatile as stem cells from embryos. Adult stem cells may not be able to provide cells for all kinds of tissues, and in addition they are difficult to isolate because they are so rare in the body. Thus, adult stem cells do not hold as much promise as do stem cells from embryos.”

Now let us look at some of the moral issues involved in this research from an Islamic perspective.

Shari’ah Perspective on Stem Cells Research:
Married couples who cannot have pregnancy in a normal way are allowed to have in vitro fertilization as long as the fertilized ovum is placed in the womb of the woman from whom the egg the was taken (not a surrogate mother). The fertilization has to be with the sperm of her lawful husband during their married life, not after divorce or after the death of the husband. This is the general conclusion of various Muslim jurists’ meetings that discussed this subject.
Having recognized that in vitro fertilization is permissible in Islam, now the first question that we should ask is that should an embryo, which is formed within a few days after an artificial fertilization and is not yet in the womb of its mother, be considered a human being, with all the rights of a human being?

According to the Shari’ah we should make a distinction between actual life and potential life. Also we should make a clear distinction between the fertilized ovum in the dish and the fertilized ovum in the womb of its mother. Indeed an embryo is valuable. It has the potential to grow into a human being, but it is not yet a human being. Similarly there is big difference in having something in a test tube or dish or something in the body of a human being. As mentioned above these embryos were developed initially in the laboratory solely for the sake of reproduction and, due to limitations of the in vitro fertilization technique, they were produced in excess of what was required for this purpose. As a result, the remaining embryos would have either been frozen indefinitely or destroyed. If these embryos were treated as full human, it would have been forbidden to produce them in excess and to destroy them later. No one treats them as humans. Destroying such embryos is not called and cannot be called abortion. We disagree with the Catholic position that this is “equivalent to infanticide”.

Muslim jurists have made a clear distinction between the early stages of pregnancy (first 40 days) and its later stages. It is mentioned that if someone attacks a pregnant woman and aborts her baby in the early stages of her pregnancy, that person’s punishment will be less than that of the person who does that during full pregnancy. And if he kills the child after the birth, then he is liable to be punished for homicide.

The second question is whether according to the Shari’ah it is acceptable to destroy an embryo for the sake of research, even if this research can potentially cure many otherwise fatal diseases?
Our answer is that the embryo in this stage is not human. It is not in its natural environment, the womb. If it is not placed in the womb it will not survive and it will not become a human being. So there is nothing wrong in doing this research, especially if this research has a potential to cure diseases. However, it is important that we establish strict rules against the misuse of embryos. Research on embryos has the potential for misuse, for instance in regards to the donors of these cells, and we should anticipate what these misuses might be and establish safeguards against them. (For example, doctors might have infertility patient go through extra cycles of ovulation just so they can obtain more embryos, or they might pay women to produce embryos, or embryos might be obtained without the consent of the donors). In making rules the authorities should also clarify that there is a difference between the use of “spare” embryos from in vitro fertilization procedures which would be destroyed regardless, as compared to the deliberate production of embryos for stem cell research. Each year thousands of embryos are wasted in fertility clinics around the world. Such embryos should not be wasted, they should be used for research.

It is also good to encourage the research on the alternative: to use adult stem cells instead of embryonic or fetal stem cells.. This would be much less controversial. However, it seems from the discussion of the experts in the field that adult stem cells are not nearly as useful as embryonic stem cells in their ability to differentiate into different cell types and would therefore not be as applicable in treating many diseases.

Until more research is done on this subject and Muslim scholars deliberate in detail on various aspects of this research, humbly following recommendations are in order:
  1. It is claimed by the experts in the field that the research on stem cells has great potential to relieve human disease and suffering. If this is the case then it is not only allowed but it is obligatory (fard kifayah) to pursue this research.
  2. The use of embryonic stem cells should be very heavily limited. Only allow isolation of stem cells from frozen embryos that were created for the purpose of in vitro fertilization and would otherwise have been destroyed. Obtain full consent from the donors. Provide safeguards against monetary compensation to embryo donors and against the creation of embryos in excess of what is required for in vitro fertilization.
  3. Perhaps research using stem cells derived from adults will eventually prove to be most promising. We should encourage further research on the use of adult stem cells, to the point where it will be unnecessary to use embryos for this purpose. Specifically, we should find better ways to isolate existing stem cells in the human body.
taken from: http://www.pakistanlink.com/religion/2001/0803.html

Wednesday, October 22, 2008

Minority Scientists Endorsing Senators Barack Obama and Senator Joe Biden


...I think ALL scientists should endorse Obama and Biden given that their platform seems more suitable for the future of science than McCain's. Below the chart is an email that I received from a group of Minority Scientists.


This chart is from Popular Mechanics. The checks represent proposals released by the candidate at the time this was taken.



Click around for proposals Auto Digital/
Tech
Energy/
Climate
Environment Infrastructure Science/
Education
Space
Obama has policy has policy has policy has policy has policy has policy has policy
McCain has policy has policy has policy


Obama and Biden plan to Double over a 10 year period the federal investment in basic research. (That means I get paid in the future.) Check out the their plan for science HERE.



The Email:

Dear Coll
eagues:

The most significant election in the last fifty years is fast approaching: Americans will make the all-important decision to elect the next President of the United States.
An ad hoc group, mainly of scientists of color, concerned with both science and equity decided to make a statement detailing the issues that directed our decision to endorse Senators Barack Obama and Joe Biden.

We would appreciate it if you would endorse the statement (below) so that we can present it to the public. We will publicize this statement of support.

Our plan is to distribute this email to more than eight hundred scientists of color, ask them to endorse the statement below at the following website http://www.ipetitions.com/petition/MinSci4Obama/. Please help us to distribute this email as well.

We will publicize the results before the election. Your email information will be kept confidential.

We believe Senator Obama is the candidate for President who best represents the interests of the scientific community, scientists of color, and the United States of America.

We also believe that it is important for Scientists of color to step up and declare our support for his candidacy and policies publicly and right now -- before the election.

Please forward this email to as many of your Minority Scientist friends and colleagues as you can.

The Barack Obama/ Joe Biden Science Policy committee advised us that they produced a web site called "A Vote for Science" ( http://www.youtube.com/user/AVoteForScience) which collects brief video statements of scientists who wish to endorse Obama. We encourage you to participate in this project. We also encourage you to submit your own op-ed pieces and letters to the editor especially if you live in battleground states.


Thank you
Morales, Jose F., PhD
Associate Research Scientist, Joint Center for Systems Biology, Columbia University, jm3259@columbia.edu

Dottin, Robert, PhD
Professor of Biology Hunter College of the City University of New York, robertdottin@yahoo.com

Gadea, Bedrick, PhD
Postdoctoral Fellow, Memorial Sloan Kettering Cancer Center

Chamany, Katayoun, PhD
Associate Professor of Biology, The New School for Liberal Arts

Alderete, John, PhD
Associate Vice Provost for Research, Professor, School of Molecular Biosciences, Director, Center for Integrated Biotechnology, Washington State University

Gemeda, Mekbib
Assistant Dean for Diversity Affairs and Community Health, Associate Director, NYU Institute for Community Health and Research, NYU School of Medicine

Saturday, October 11, 2008

Islamic Perspective: Ascension & Dimension



Do you know what this is? Its called a tesseract. It exists in 4th dimension.

"In physics and mathematics, a sequence of n numbers can be understood as a location in an n-dimensional space. When n=4, the set of all such locations is called 4-dimensional space, or, colloquially, the fourth dimension.
Such a space differs from the familiar 3-dimensional space that we live in, in that it has an extra dimension, an extra degree of freedom. This extra dimension may be interpreted either as time, or as a literal fourth dimension of space, a fourth spatial dimension."
It is actually studied in Geometry and Astronomy. To get a better grasp of this "4th Dimension", I will allow Carl Sagan to explain it to you (lol, no really). Now if your Muslim, or familiar with Islamic concepts....tell me what the topics in this video remind you of???





This video reminded me of Mi' raj (the ascension) of the Prophet (saw). It sounds just like the ability of Allah's angels. I mean can't you imagine the design of beings (the unseen) being explained by this concept of the 4th dimention!? I don't mean to cross any religious sensitivities because, surely Allah knows best.


11:123 To Allah do belong the unseen (secrets) of the heavens and the earth, and to Him goeth back every affair (for decision)...
But, I just find it amazing how we are so limited in our thinking and knowledge of things. We should never come to a point in our search of knowledge where we feel we have mastered a particular subject or particular field. Even one with a Master's degree or Ph.D. has to be humbled at the fact that he or she cannot find the ceiling of knowledge within their field.

Yesterday, I went to a halaqah (Islamic study group) that discussed primarily the future of Islam in America. There was a brother there who kept arguing that Saudi, Yemen, Syria, etc. will always be the source of the highest levels of Islamic knowledge. Even in the future, we could only reach a certain level of Islamic knowledge or scholarship by studying in the states. Now, this topic is a whole 'nother post in itself, but just to point out one thing:

I could not help but think of Imam W. D. Mohammed. (the brother actually mentioned him and his program to send his students to Syria for study.) Imam Mohammed was not taught by any scholar and whether you choose to recognize him as one the most learned individuals or not (which many Saudi Sheikhs have), he brings a NEW insight and a NEW tafsir to the Qur'an and life of the Prophet (saw).

America may or may not become the hub of Islamic knowledge in the future. Honestly, to me, it doesn't matter. What I envision (and surely Allah knows best) is a NEW perspective that will be born out of Islamic studies in the states. A perspective that will be a direct result of Muslims experiences, environment, and demand for Islamic life. I can't say that this will be a New Fiqh, a New Mathhab, etc. but I see Muslims coming to America, in the near future, to study an Islamic Science that is unique to the perspective and experience of Muslims in America. And I think it will be spawned by Imam W. D. Mohammed's community!

I will leave you with the Imam's commentary on the Night Journey (Mi' raj), a NEW perspective born out of America. Imam has said that the ascension represents the 7 elevations of Prophet Mohammed's soul from Adam to Abraham. The Imam said the ascension is also connected to the Night of Power (see last comment).


Imam Mohammed after mentioning the Prophets at the various levels of ascension stated the following:
"So it was an ascent. That's vertical isn't it? He went straight up from where? He went straight from the Kabah, from the Masjid al-Haram in Mecca into the heavens. So the vertical mustaqeem is the path of uprightness. The development of the soul in virtues, purity and high principles, etc., that is the ascent. Then he travels. That's horizontal. Now you tell me that isn't a cross? If the ascent is vertical and the travel is horizontal you have a cross. So see how the mysteries are addressed in so many ways to educate the blessed ones? Praise be to Allah.

So the horizontal is the important relationships that man has with man, families have with families, industry has with industry, communities have with communities. That's the horizontal. So he was taken to the place that was the symbol of the glorious time for the Jews, to Jerusalem where there was the kingdom of Solomon and the ruins are still there. When they go to the Wailing Wall they are weeping on what is left of that great kingdom. What are they weeping for? "We lost this, enemies conquered us"; not the Muslims. Before the Muslims it was the Romans. Really the Muslims did not want to conquer them. The Muslims never wanted to conquer them. The Muslims just wanted to have their rights like they wanted to have their rights.

Madinah established after the Ascent and night travel

Allah took him to the great peak for excellence in the life of those people symbolized as the government under Solomon, the wise, upon him be peace. And you know what happened. Later, almost right away, he decided to go to Madinah to answer the invitation of the people of Madinah. And with the experience and knowledge that Allah gave him in that ascent and that travel, night visit, he was prepared to go and establish the first Muslim world in Madinah. It was a world he was to establish. So he went to Madinah. We say government but it was a world. It was a new world. He went there to Madinah and he became the leader for the establishment of the ummah, the new world of Islam."
-IWDM 2006

Monday, August 4, 2008

Science (from the Latin scientia, meaning "knowledge")

2:99 We have sent down to thee Manifest Signs (ayat); and none reject them but those who are perverse. (Holy Qur'an)

I'm a Scientist. In every sense of the word. I strive to take head to the signs of my Lord. Those that are in the Qur'an as well as in creation. I have dedicated my life to understanding Allah's creation and I'm currently learning how be a Researcher. I'm in the process of mastering my particular field of study and obtain a degree to certify my training (PhD).

Recently, I came up to a road-block: I've had a problem finding a lab to join. In my graduate program, you are requried to do three rotations in various labs until you find one that you like (and likes you). If only it were that easy...

In recent years, there has been a serious problem in science with funding. Grants for research are much harder to obtain. There is a decline of government support for science and a growing dominance of private spending over American research. Thanks Bush (my scapegoat). This shrinkage of funding has led to very "cautious" lab managers who fear that they can't support another member to their lab. This has been my problem. I keep finding that many Principal Investigators (PI) are not so confident about their funding and are not taking on any new students.

But, All Praise due to G-d!!! I found a lab. This is a major step in my scientific career and I'm excited about what the future holds. To say it will require a lot of hard work would be an understatement. I think I've just signed up for another wife. (Calm down, honey.) Research takes alot of time and energy. As my PI used to say, "Research is 1% inspiration and 99% perspiration." I pray Allah makes it easier for me.

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